Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm28149-201ENSMUST00000187102 378 ntBASIC4.29□□□□□ -1.72
Cux1P53564 Gm28768-201ENSMUST00000189034 378 ntBASIC4.29□□□□□ -1.72
Cux1P53564 Gm38166-201ENSMUST00000191660 471 ntBASIC4.29□□□□□ -1.72
Cux1P53564 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cux1P53564 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.29□□□□□ -1.72
Cux1P53564 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cux1P53564 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC4.29□□□□□ -1.72
Cux1P53564 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.29□□□□□ -1.72
Cux1P53564 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cux1P53564 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cux1P53564 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cux1P53564 Gm8392-201ENSMUST00000185647 835 ntBASIC4.28□□□□□ -1.72
Cux1P53564 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.28□□□□□ -1.72
Cux1P53564 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.28□□□□□ -1.72
Cux1P53564 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.28□□□□□ -1.72
Cux1P53564 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cux1P53564 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.28□□□□□ -1.72
Cux1P53564 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.28□□□□□ -1.72
Cux1P53564 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cux1P53564 Mir682-201ENSMUST00000102281 96 ntBASIC4.27□□□□□ -1.73
Cux1P53564 Gm24273-201ENSMUST00000102332 164 ntBASIC4.27□□□□□ -1.73
Cux1P53564 Gm25529-201ENSMUST00000104850 92 ntBASIC4.27□□□□□ -1.73
Cux1P53564 Gm20773-201ENSMUST00000178940 681 ntBASIC4.27□□□□□ -1.73
Cux1P53564 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cux1P53564 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.27□□□□□ -1.73
Cux1P53564 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.27□□□□□ -1.73
Cux1P53564 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.27□□□□□ -1.73
Cux1P53564 Gm43379-201ENSMUST00000196253 7726 ntBASIC4.27□□□□□ -1.73
Cux1P53564 Gm29148-201ENSMUST00000188140 336 ntBASIC4.26□□□□□ -1.73
Cux1P53564 Gm1833-201ENSMUST00000191608 682 ntBASIC4.26□□□□□ -1.73
Cux1P53564 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.26□□□□□ -1.73
Cux1P53564 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cux1P53564 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cux1P53564 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.26□□□□□ -1.73
Cux1P53564 Gm9218-201ENSMUST00000121068 2694 ntBASIC4.26□□□□□ -1.73
Cux1P53564 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cux1P53564 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cux1P53564 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cux1P53564 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.26□□□□□ -1.73
Cux1P53564 Gm25553-201ENSMUST00000158076 79 ntBASIC4.26□□□□□ -1.73
Cux1P53564 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.26□□□□□ -1.73
Cux1P53564 Gm43704-201ENSMUST00000196164 496 ntBASIC4.26□□□□□ -1.73
Cux1P53564 Gm43384-201ENSMUST00000200569 637 ntBASIC4.26□□□□□ -1.73
Cux1P53564 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.26□□□□□ -1.73
Cux1P53564 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cux1P53564 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cux1P53564 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Gm43879-201ENSMUST00000203811 3760 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Cux1P53564 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cux1P53564 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Cux1P53564 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cux1P53564 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Gm25863-201ENSMUST00000158249 329 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.25□□□□□ -1.73
Cux1P53564 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC4.25□□□□□ -1.73
Cux1P53564 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.25□□□□□ -1.73
Cux1P53564 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.25□□□□□ -1.73
Cux1P53564 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cux1P53564 Gm25699-201ENSMUST00000082896 167 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cux1P53564 Gm10343-201ENSMUST00000096279 348 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Gm14912-201ENSMUST00000120166 1773 ntBASIC4.25□□□□□ -1.73
Cux1P53564 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Cux1P53564 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.24□□□□□ -1.73
Cux1P53564 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cux1P53564 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Cux1P53564 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC4.24□□□□□ -1.73
Cux1P53564 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.24□□□□□ -1.73
Cux1P53564 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cux1P53564 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.24□□□□□ -1.73
Cux1P53564 Gm18602-201ENSMUST00000209794 851 ntBASIC4.24□□□□□ -1.73
Cux1P53564 Gm6842-201ENSMUST00000211361 390 ntBASIC4.24□□□□□ -1.73
Cux1P53564 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.24□□□□□ -1.73
Cux1P53564 Gm16436-201ENSMUST00000121510 1607 ntBASIC4.24□□□□□ -1.73
Cux1P53564 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cux1P53564 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
Cux1P53564 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cux1P53564 Gm5392-201ENSMUST00000122189 789 ntBASIC4.23□□□□□ -1.73
Cux1P53564 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.23□□□□□ -1.73
Cux1P53564 Gm24075-201ENSMUST00000158175 72 ntBASIC4.23□□□□□ -1.73
Cux1P53564 Gm18953-201ENSMUST00000175694 300 ntBASIC4.23□□□□□ -1.73
Cux1P53564 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.23□□□□□ -1.73
Cux1P53564 Gm44030-201ENSMUST00000204865 432 ntBASIC4.23□□□□□ -1.73
Cux1P53564 Snora23-201ENSMUST00000082517 184 ntBASIC4.23□□□□□ -1.73
Cux1P53564 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cux1P53564 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Cux1P53564 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Cux1P53564 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.22□□□□□ -1.73
Cux1P53564 Gm22227-201ENSMUST00000157356 259 ntBASIC4.22□□□□□ -1.73
Cux1P53564 Mir378a-201ENSMUST00000198300 66 ntBASIC4.22□□□□□ -1.73
Cux1P53564 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.22□□□□□ -1.73
Cux1P53564 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.22□□□□□ -1.73
Cux1P53564 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cux1P53564 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cux1P53564 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cux1P53564 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cux1P53564 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms