Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm8338-201ENSMUST00000163928 363 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22258-201ENSMUST00000177645 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm26502-201ENSMUST00000177732 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l13-201ENSMUST00000177737 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25350-201ENSMUST00000177849 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l15-201ENSMUST00000177940 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm23446-201ENSMUST00000177977 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l4-201ENSMUST00000177982 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm26201-201ENSMUST00000178047 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm24711-201ENSMUST00000178062 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm24609-201ENSMUST00000178166 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm23265-201ENSMUST00000178321 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22812-201ENSMUST00000178329 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l3-201ENSMUST00000178370 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm26246-201ENSMUST00000178388 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22131-201ENSMUST00000178415 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25155-201ENSMUST00000178450 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm24760-201ENSMUST00000178530 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm26032-201ENSMUST00000178535 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22285-201ENSMUST00000178576 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22417-201ENSMUST00000178656 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l2-201ENSMUST00000178675 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm26270-201ENSMUST00000178690 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l16-201ENSMUST00000178777 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25074-201ENSMUST00000178782 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25210-201ENSMUST00000178813 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25157-201ENSMUST00000178914 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm23313-201ENSMUST00000178931 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l17-201ENSMUST00000178936 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm23089-201ENSMUST00000178947 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22046-201ENSMUST00000179027 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm24153-201ENSMUST00000179280 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25597-201ENSMUST00000179388 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22941-201ENSMUST00000179630 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22631-201ENSMUST00000179656 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25816-201ENSMUST00000179764 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm26188-201ENSMUST00000179963 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm25471-201ENSMUST00000180126 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm26433-201ENSMUST00000180227 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm23862-201ENSMUST00000180342 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm22128-201ENSMUST00000180346 94 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm29228-201ENSMUST00000185489 418 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm28146-201ENSMUST00000185517 701 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm28574-201ENSMUST00000185757 699 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Shmt1P50431 Gm28397-201ENSMUST00000187970 699 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm29366-201ENSMUST00000190481 699 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.7□□□□□ -1.66
Shmt1P50431 Gm19131-201ENSMUST00000203408 789 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm2676-201ENSMUST00000207279 606 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.7□□□□□ -1.66
Shmt1P50431 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.7□□□□□ -1.66
Shmt1P50431 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.7□□□□□ -1.66
Shmt1P50431 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Shmt1P50431 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm23503-201ENSMUST00000083903 107 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Shmt1P50431 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Shmt1P50431 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Shmt1P50431 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Shmt1P50431 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.7□□□□□ -1.66
Shmt1P50431 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Shmt1P50431 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
Shmt1P50431 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Shmt1P50431 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Shmt1P50431 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Shmt1P50431 Gm25111-201ENSMUST00000116686 147 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm11268-201ENSMUST00000118347 267 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm14292-201ENSMUST00000118761 456 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm15075-201ENSMUST00000122187 477 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm10059-201ENSMUST00000131139 171 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.69□□□□□ -1.66
Shmt1P50431 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.69□□□□□ -1.66
Shmt1P50431 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Shmt1P50431 Gm5258-201ENSMUST00000165437 327 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm17421-201ENSMUST00000167845 674 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Shmt1P50431 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.69□□□□□ -1.66
Shmt1P50431 Gm13249-201ENSMUST00000177803 345 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms