Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LtbrP50284 Gm11561-201ENSMUST00000117429 417 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm14890-201ENSMUST00000117660 676 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm15670-201ENSMUST00000117740 447 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm15603-201ENSMUST00000119252 492 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LtbrP50284 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LtbrP50284 Gm25430-201ENSMUST00000157614 289 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm16326-201ENSMUST00000162843 414 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm25071-201ENSMUST00000175232 70 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm23631-201ENSMUST00000175291 123 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm26501-201ENSMUST00000178307 107 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm29592-201ENSMUST00000189434 370 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm9696-202ENSMUST00000191541 830 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.5□□□□□ -1.37
LtbrP50284 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.5□□□□□ -1.37
LtbrP50284 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LtbrP50284 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.5□□□□□ -1.37
LtbrP50284 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LtbrP50284 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LtbrP50284 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LtbrP50284 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LtbrP50284 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
LtbrP50284 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LtbrP50284 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm14846-201ENSMUST00000121868 216 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm25783-201ENSMUST00000122525 190 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm23211-201ENSMUST00000122717 308 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm25883-201ENSMUST00000157781 271 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm23279-201ENSMUST00000157912 97 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm25486-201ENSMUST00000158726 63 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm25834-201ENSMUST00000158916 101 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm24085-201ENSMUST00000175172 116 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm27545-201ENSMUST00000184755 202 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm37997-201ENSMUST00000193515 267 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Mir409-201ENSMUST00000198153 79 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Gm8942-201ENSMUST00000217892 400 ntBASIC6.49□□□□□ -1.37
LtbrP50284 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LtbrP50284 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LtbrP50284 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LtbrP50284 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LtbrP50284 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LtbrP50284 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.48□□□□□ -1.37
LtbrP50284 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.48□□□□□ -1.37
LtbrP50284 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LtbrP50284 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC6.48□□□□□ -1.37
LtbrP50284 n-R5s52-201ENSMUST00000104614 113 ntBASIC6.48□□□□□ -1.37
LtbrP50284 Gm24629-201ENSMUST00000122762 89 ntBASIC6.48□□□□□ -1.37
LtbrP50284 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LtbrP50284 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.48□□□□□ -1.37
LtbrP50284 Gm42643-201ENSMUST00000200504 279 ntBASIC6.48□□□□□ -1.37
LtbrP50284 Gm29781-201ENSMUST00000203862 478 ntBASIC6.48□□□□□ -1.37
LtbrP50284 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Gm23624-201ENSMUST00000082463 321 ntBASIC6.48□□□□□ -1.37
LtbrP50284 Gm25755-201ENSMUST00000083396 107 ntBASIC6.48□□□□□ -1.37
LtbrP50284 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LtbrP50284 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Gm43527-201ENSMUST00000198749 3178 ntBASIC6.48□□□□□ -1.37
LtbrP50284 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LtbrP50284 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LtbrP50284 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LtbrP50284 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
LtbrP50284 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LtbrP50284 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LtbrP50284 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
LtbrP50284 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LtbrP50284 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC6.47□□□□□ -1.37
LtbrP50284 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC6.47□□□□□ -1.37
LtbrP50284 Gm15162-201ENSMUST00000119325 283 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Gm24630-201ENSMUST00000122768 106 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC6.47□□□□□ -1.37
LtbrP50284 Gm26279-201ENSMUST00000157095 102 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Gm22870-201ENSMUST00000157501 112 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Gm23209-201ENSMUST00000158667 110 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Gm22257-201ENSMUST00000158687 301 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Nron-204ENSMUST00000158971 370 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Gm24168-201ENSMUST00000178825 107 ntBASIC6.47□□□□□ -1.37
LtbrP50284 Gm24968-201ENSMUST00000179817 107 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms