Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.71□□□□□ -1.65
Ercc3P49135 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ercc3P49135 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ercc3P49135 Gm23063-201ENSMUST00000102350 93 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Mir669p-2-201ENSMUST00000103868 87 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Mir669p-1-201ENSMUST00000103884 87 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm11268-201ENSMUST00000118347 267 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm15916-201ENSMUST00000118355 736 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm26424-201ENSMUST00000122530 104 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.71□□□□□ -1.66
Ercc3P49135 Gm23773-201ENSMUST00000158985 296 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ercc3P49135 Gm17155-201ENSMUST00000165969 473 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Mir3112-201ENSMUST00000175431 82 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm23145-201ENSMUST00000178912 79 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm24520-201ENSMUST00000179510 110 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Mir6938-201ENSMUST00000184173 63 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm28255-201ENSMUST00000187101 694 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ercc3P49135 Gm37300-201ENSMUST00000193327 280 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm37495-201ENSMUST00000194590 264 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Ercc3P49135 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.71□□□□□ -1.66
Ercc3P49135 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.71□□□□□ -1.66
Ercc3P49135 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 AC137902.2-201ENSMUST00000227989 576 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ercc3P49135 Gm23939-201ENSMUST00000082880 133 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ercc3P49135 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.71□□□□□ -1.66
Ercc3P49135 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ercc3P49135 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ercc3P49135 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ercc3P49135 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm24792-201ENSMUST00000104286 128 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm13478-201ENSMUST00000118312 413 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm12900-201ENSMUST00000120919 573 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm23317-201ENSMUST00000157999 129 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm27861-201ENSMUST00000183920 214 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm7142-201ENSMUST00000194232 586 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm4248-201ENSMUST00000196905 316 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm44050-201ENSMUST00000204263 527 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm19253-201ENSMUST00000204279 307 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm19726-201ENSMUST00000205008 240 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm7786-201ENSMUST00000210494 436 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ercc3P49135 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.7□□□□□ -1.66
Ercc3P49135 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm3829-201ENSMUST00000222362 619 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ercc3P49135 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ercc3P49135 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ercc3P49135 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ercc3P49135 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.7□□□□□ -1.66
Ercc3P49135 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Ercc3P49135 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ercc3P49135 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Ercc3P49135 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Ercc3P49135 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ercc3P49135 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ercc3P49135 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ercc3P49135 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm24120-201ENSMUST00000103978 129 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm22472-201ENSMUST00000104115 134 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm23322-201ENSMUST00000104464 167 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.69□□□□□ -1.66
Ercc3P49135 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ercc3P49135 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ercc3P49135 Gm6584-201ENSMUST00000119671 447 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm16445-201ENSMUST00000120399 714 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm5646-201ENSMUST00000120568 714 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm11645-201ENSMUST00000121589 649 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.69□□□□□ -1.66
Ercc3P49135 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.69□□□□□ -1.66
Ercc3P49135 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ercc3P49135 Gm26148-201ENSMUST00000157430 68 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm23032-201ENSMUST00000157995 107 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC4.69□□□□□ -1.66
Ercc3P49135 Gm29259-201ENSMUST00000186396 694 ntBASIC4.69□□□□□ -1.66
Ercc3P49135 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms