Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.9□□□□□ -1.94
HttP42859 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
HttP42859 Gm25068-201ENSMUST00000103895 110 ntBASIC2.9□□□□□ -1.95
HttP42859 Gm14586-201ENSMUST00000119571 408 ntBASIC2.9□□□□□ -1.95
HttP42859 Gm12213-201ENSMUST00000119924 353 ntBASIC2.9□□□□□ -1.95
HttP42859 Mir669n-201ENSMUST00000158636 54 ntBASIC2.9□□□□□ -1.95
HttP42859 Gm15974-201ENSMUST00000159103 531 ntBASIC2.9□□□□□ -1.95
HttP42859 Gm29610-201ENSMUST00000187749 453 ntBASIC2.9□□□□□ -1.95
HttP42859 AC132384.13-201ENSMUST00000219556 1159 ntBASIC2.9□□□□□ -1.95
HttP42859 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
HttP42859 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
HttP42859 Gm18486-201ENSMUST00000184040 298 ntBASIC2.9□□□□□ -1.95
HttP42859 Gm5374-201ENSMUST00000222868 657 ntBASIC2.9□□□□□ -1.95
HttP42859 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.9□□□□□ -1.95
HttP42859 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HttP42859 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC2.9□□□□□ -1.95
HttP42859 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC2.89□□□□□ -1.95
HttP42859 Gm43601-201ENSMUST00000196294 945 ntBASIC2.89□□□□□ -1.95
HttP42859 Gm18330-201ENSMUST00000199246 547 ntBASIC2.89□□□□□ -1.95
HttP42859 Gm18026-201ENSMUST00000222789 727 ntBASIC2.89□□□□□ -1.95
HttP42859 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HttP42859 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HttP42859 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.89□□□□□ -1.95
HttP42859 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HttP42859 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.89□□□□□ -1.95
HttP42859 Gm24670-201ENSMUST00000104154 132 ntBASIC2.89□□□□□ -1.95
HttP42859 Gm37996-201ENSMUST00000191859 367 ntBASIC2.89□□□□□ -1.95
HttP42859 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.89□□□□□ -1.95
HttP42859 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HttP42859 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HttP42859 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HttP42859 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HttP42859 Gm8979-201ENSMUST00000183386 7296 ntBASIC2.89□□□□□ -1.95
HttP42859 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HttP42859 Gm8338-201ENSMUST00000163928 363 ntBASIC2.88□□□□□ -1.95
HttP42859 Mir6363-201ENSMUST00000184880 114 ntBASIC2.88□□□□□ -1.95
HttP42859 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.88□□□□□ -1.95
HttP42859 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.88□□□□□ -1.95
HttP42859 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HttP42859 Gm42927-201ENSMUST00000200624 3841 ntBASIC2.88□□□□□ -1.95
HttP42859 AC135119.1-201ENSMUST00000227935 3717 ntBASIC2.88□□□□□ -1.95
HttP42859 Gm44525-201ENSMUST00000183129 2634 ntBASIC2.88□□□□□ -1.95
HttP42859 Gm44078-201ENSMUST00000204652 2646 ntBASIC2.88□□□□□ -1.95
HttP42859 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.88□□□□□ -1.95
HttP42859 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HttP42859 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.88□□□□□ -1.95
HttP42859 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HttP42859 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HttP42859 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.88□□□□□ -1.95
HttP42859 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HttP42859 Gm2033-201ENSMUST00000210753 2287 ntBASIC2.88□□□□□ -1.95
HttP42859 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.88□□□□□ -1.95
HttP42859 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HttP42859 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HttP42859 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HttP42859 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC2.87□□□□□ -1.95
HttP42859 Gm28871-201ENSMUST00000186191 687 ntBASIC2.87□□□□□ -1.95
HttP42859 Gm28057-201ENSMUST00000186603 615 ntBASIC2.87□□□□□ -1.95
HttP42859 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HttP42859 Gm29366-201ENSMUST00000190481 699 ntBASIC2.87□□□□□ -1.95
HttP42859 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HttP42859 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.87□□□□□ -1.95
HttP42859 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HttP42859 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.87□□□□□ -1.95
HttP42859 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
HttP42859 Gm15399-201ENSMUST00000118055 724 ntBASIC2.87□□□□□ -1.95
HttP42859 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.87□□□□□ -1.95
HttP42859 Gm26585-201ENSMUST00000180890 630 ntBASIC2.87□□□□□ -1.95
HttP42859 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HttP42859 Gm27700-201ENSMUST00000185003 81 ntBASIC2.87□□□□□ -1.95
HttP42859 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HttP42859 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.87□□□□□ -1.95
HttP42859 Gm45879-201ENSMUST00000212521 392 ntBASIC2.87□□□□□ -1.95
HttP42859 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC2.87□□□□□ -1.95
HttP42859 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
HttP42859 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HttP42859 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HttP42859 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
HttP42859 Gm27470-201ENSMUST00000184070 210 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.86□□□□□ -1.95
HttP42859 Gm44887-201ENSMUST00000208980 178 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.86□□□□□ -1.95
HttP42859 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.86□□□□□ -1.95
HttP42859 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HttP42859 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
HttP42859 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HttP42859 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HttP42859 Gm44682-201ENSMUST00000208501 2614 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm9850-201ENSMUST00000117916 227 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm45259-201ENSMUST00000209217 1006 ntBASIC2.86□□□□□ -1.95
HttP42859 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HttP42859 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm7974-201ENSMUST00000117154 408 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
HttP42859 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC2.86□□□□□ -1.95
HttP42859 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm19224-201ENSMUST00000190477 793 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm37732-201ENSMUST00000194377 316 ntBASIC2.86□□□□□ -1.95
HttP42859 Gm18015-201ENSMUST00000214879 316 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms