Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43979-201ENSMUST00000203179 475 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Gm18645-201ENSMUST00000209593 651 ntBASIC4.31□□□□□ -1.72
Traf1P39428 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.31□□□□□ -1.72
Traf1P39428 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.31□□□□□ -1.72
Traf1P39428 AC164629.1-201ENSMUST00000220250 1113 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Gm3565-201ENSMUST00000222670 609 ntBASIC4.31□□□□□ -1.72
Traf1P39428 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Traf1P39428 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.31□□□□□ -1.72
Traf1P39428 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Traf1P39428 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Traf1P39428 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.31□□□□□ -1.72
Traf1P39428 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Traf1P39428 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Traf1P39428 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Traf1P39428 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Traf1P39428 Gm6071-201ENSMUST00000119561 440 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Gm23167-201ENSMUST00000157155 103 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Gm16236-201ENSMUST00000159588 379 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Traf1P39428 Gm19637-201ENSMUST00000185933 579 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Gm37989-201ENSMUST00000195202 803 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 Gm30674-201ENSMUST00000214523 392 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Traf1P39428 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Traf1P39428 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Traf1P39428 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.3□□□□□ -1.72
Traf1P39428 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Traf1P39428 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Traf1P39428 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Traf1P39428 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Traf1P39428 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Traf1P39428 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Traf1P39428 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm14845-201ENSMUST00000121259 306 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm14564-201ENSMUST00000122159 294 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm13676-201ENSMUST00000122185 591 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm26476-201ENSMUST00000122618 313 ntBASIC4.29□□□□□ -1.72
Traf1P39428 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm23312-201ENSMUST00000158774 102 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm25748-201ENSMUST00000175487 70 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm20574-201ENSMUST00000182867 917 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm18727-201ENSMUST00000185981 553 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm29460-201ENSMUST00000188607 714 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm29365-201ENSMUST00000189461 699 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.29□□□□□ -1.72
Traf1P39428 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm18644-201ENSMUST00000211458 815 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm35262-201ENSMUST00000215133 267 ntBASIC4.29□□□□□ -1.72
Traf1P39428 CT573422.1-201ENSMUST00000216655 405 ntBASIC4.29□□□□□ -1.72
Traf1P39428 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm8785-201ENSMUST00000220259 487 ntBASIC4.29□□□□□ -1.72
Traf1P39428 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.29□□□□□ -1.72
Traf1P39428 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.29□□□□□ -1.72
Traf1P39428 Zmym2-202ENSMUST00000223669 1281 ntBASIC4.29□□□□□ -1.72
Traf1P39428 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Traf1P39428 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm26439-201ENSMUST00000082592 106 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm25480-201ENSMUST00000083217 133 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm24611-201ENSMUST00000083272 107 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm24928-201ENSMUST00000083399 107 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Gm25897-201ENSMUST00000083709 107 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Traf1P39428 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Traf1P39428 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.29□□□□□ -1.72
Traf1P39428 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Traf1P39428 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Traf1P39428 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Traf1P39428 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Traf1P39428 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Traf1P39428 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms