Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lig1P37913 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lig1P37913 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lig1P37913 Gm13567-201ENSMUST00000118026 247 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm12571-201ENSMUST00000118132 243 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm7429-201ENSMUST00000118664 348 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm14793-201ENSMUST00000118739 311 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm15553-201ENSMUST00000118757 430 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm11438-201ENSMUST00000121582 189 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm12340-201ENSMUST00000121617 462 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm25104-201ENSMUST00000122476 163 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm22960-201ENSMUST00000122517 104 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.84□□□□□ -1.63
Lig1P37913 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lig1P37913 Gm25559-201ENSMUST00000157182 74 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm22378-201ENSMUST00000157481 111 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm26036-201ENSMUST00000158149 144 ntBASIC4.84□□□□□ -1.63
Lig1P37913 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.84□□□□□ -1.63
Lig1P37913 Gm21758-201ENSMUST00000179336 819 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Mir6341-201ENSMUST00000183490 121 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lig1P37913 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.84□□□□□ -1.63
Lig1P37913 Gm28802-201ENSMUST00000188624 944 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm29647-201ENSMUST00000188795 666 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lig1P37913 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lig1P37913 Gm29097-201ENSMUST00000190273 422 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm28337-201ENSMUST00000190425 666 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm28504-201ENSMUST00000190977 666 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm31511-201ENSMUST00000193134 657 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm35843-201ENSMUST00000193716 666 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm36954-201ENSMUST00000195362 363 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm43853-201ENSMUST00000197162 301 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.84□□□□□ -1.63
Lig1P37913 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
Lig1P37913 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.84□□□□□ -1.63
Lig1P37913 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm45742-201ENSMUST00000212400 433 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm35262-201ENSMUST00000215133 267 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.84□□□□□ -1.63
Lig1P37913 Gm29809-201ENSMUST00000218423 493 ntBASIC4.84□□□□□ -1.63
Lig1P37913 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.84□□□□□ -1.63
Lig1P37913 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.84□□□□□ -1.63
Lig1P37913 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Lig1P37913 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lig1P37913 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lig1P37913 Gm22810-201ENSMUST00000082741 158 ntBASIC4.84□□□□□ -1.63
Lig1P37913 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
Lig1P37913 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lig1P37913 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Lig1P37913 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.84□□□□□ -1.64
Lig1P37913 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Lig1P37913 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.84□□□□□ -1.64
Lig1P37913 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lig1P37913 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lig1P37913 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lig1P37913 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm12891-201ENSMUST00000119358 240 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm14927-201ENSMUST00000120283 454 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm14411-201ENSMUST00000121798 914 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm22986-201ENSMUST00000122753 130 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm4487-201ENSMUST00000150617 442 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm18522-201ENSMUST00000173947 650 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm20612-201ENSMUST00000176318 236 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm20673-201ENSMUST00000177167 430 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm5527-201ENSMUST00000179821 642 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Gm34015-201ENSMUST00000194908 451 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm44376-201ENSMUST00000197570 128 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lig1P37913 Gm18672-201ENSMUST00000208035 270 ntBASIC4.83□□□□□ -1.64
Lig1P37913 AC164117.2-201ENSMUST00000222090 327 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Gm9762-201ENSMUST00000036976 444 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lig1P37913 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lig1P37913 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lig1P37913 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lig1P37913 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lig1P37913 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lig1P37913 Mir34b-201ENSMUST00000083558 84 ntBASIC4.83□□□□□ -1.64
Lig1P37913 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lig1P37913 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lig1P37913 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.83□□□□□ -1.64
Lig1P37913 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms