Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm26479-201ENSMUST00000122620 106 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 Gm25489-201ENSMUST00000158727 141 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 Mir7028-201ENSMUST00000185016 64 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm29330-201ENSMUST00000190032 699 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm29454-201ENSMUST00000190805 393 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm36946-201ENSMUST00000192706 435 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm9134-201ENSMUST00000193186 551 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm37308-201ENSMUST00000194684 100 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 Gm42459-201ENSMUST00000199679 742 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC5.52□□□□□ -1.53
Msx1P13297 Gm44881-201ENSMUST00000205425 367 ntBASIC5.52□□□□□ -1.53
Msx1P13297 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.52□□□□□ -1.53
Msx1P13297 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm18413-201ENSMUST00000221573 655 ntBASIC5.52□□□□□ -1.53
Msx1P13297 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.52□□□□□ -1.53
Msx1P13297 n-R5s50-201ENSMUST00000083168 111 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.52□□□□□ -1.53
Msx1P13297 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Msx1P13297 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Msx1P13297 Gm26078-201ENSMUST00000104067 128 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm14842-201ENSMUST00000119577 269 ntBASIC5.51□□□□□ -1.53
Msx1P13297 AA413626-201ENSMUST00000121125 494 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm28020-201ENSMUST00000157739 67 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Mir1970-201ENSMUST00000157839 104 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm22769-201ENSMUST00000158367 98 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm23474-201ENSMUST00000158884 75 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm26287-201ENSMUST00000158887 81 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm16545-201ENSMUST00000161968 463 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 Gm17119-201ENSMUST00000163943 280 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 Gm9320-201ENSMUST00000184151 473 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC5.51□□□□□ -1.53
Msx1P13297 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.51□□□□□ -1.53
Msx1P13297 Gm38015-201ENSMUST00000193048 188 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.51□□□□□ -1.53
Msx1P13297 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm45156-201ENSMUST00000207255 439 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.51□□□□□ -1.53
Msx1P13297 Gm45772-201ENSMUST00000212961 240 ntBASIC5.51□□□□□ -1.53
Msx1P13297 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.51□□□□□ -1.53
Msx1P13297 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.51□□□□□ -1.53
Msx1P13297 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.51□□□□□ -1.53
Msx1P13297 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msx1P13297 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.51□□□□□ -1.53
Msx1P13297 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msx1P13297 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.5□□□□□ -1.53
Msx1P13297 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 Gm14267-201ENSMUST00000119751 496 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm14601-201ENSMUST00000120892 236 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.5□□□□□ -1.53
Msx1P13297 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms