Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Lire1P11260 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Lire1P11260 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.83□□□□□ -1.8
Lire1P11260 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.83□□□□□ -1.8
Lire1P11260 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Lire1P11260 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Lire1P11260 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Lire1P11260 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lire1P11260 Gm24792-201ENSMUST00000104286 128 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm13155-201ENSMUST00000119277 646 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm8178-201ENSMUST00000121570 646 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm9785-202ENSMUST00000144563 593 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lire1P11260 Gm3123-201ENSMUST00000163480 480 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm4479-201ENSMUST00000178807 171 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm28396-201ENSMUST00000190309 379 ntBASIC3.82□□□□□ -1.8
Lire1P11260 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm43541-201ENSMUST00000197208 581 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm43405-201ENSMUST00000198642 337 ntBASIC3.82□□□□□ -1.8
Lire1P11260 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm43224-201ENSMUST00000201567 898 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.82□□□□□ -1.8
Lire1P11260 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.82□□□□□ -1.8
Lire1P11260 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.82□□□□□ -1.8
Lire1P11260 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lire1P11260 Gm25592-201ENSMUST00000082635 131 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Gm25403-201ENSMUST00000082971 143 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Lire1P11260 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Lire1P11260 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.82□□□□□ -1.8
Lire1P11260 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lire1P11260 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Lire1P11260 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Lire1P11260 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lire1P11260 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lire1P11260 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lire1P11260 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Lire1P11260 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm13731-201ENSMUST00000117332 196 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm12889-201ENSMUST00000118684 241 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm14554-201ENSMUST00000119548 661 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm12118-201ENSMUST00000119766 532 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm15038-201ENSMUST00000122144 296 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm22960-201ENSMUST00000122517 104 ntBASIC3.81□□□□□ -1.8
Lire1P11260 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lire1P11260 Gm25965-201ENSMUST00000157170 93 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lire1P11260 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.81□□□□□ -1.8
Lire1P11260 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lire1P11260 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm27999-201ENSMUST00000183539 193 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.81□□□□□ -1.8
Lire1P11260 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Lire1P11260 Gm8790-201ENSMUST00000194108 322 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm43043-201ENSMUST00000196579 412 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Gm17780-201ENSMUST00000207142 612 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Lire1P11260 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm6929-201ENSMUST00000210930 468 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Lire1P11260 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.81□□□□□ -1.8
Lire1P11260 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lire1P11260 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
Lire1P11260 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lire1P11260 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.81□□□□□ -1.8
Lire1P11260 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Lire1P11260 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Lire1P11260 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Lire1P11260 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.8□□□□□ -1.8
Lire1P11260 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Lire1P11260 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lire1P11260 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.8□□□□□ -1.8
Lire1P11260 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lire1P11260 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
Lire1P11260 Gm23697-201ENSMUST00000103897 110 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms