Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Mir7658-201ENSMUST00000184043 57 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm18505-201ENSMUST00000187360 790 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm37290-201ENSMUST00000195775 339 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm20039-201ENSMUST00000210329 394 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm18225-201ENSMUST00000216708 742 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm16419-201ENSMUST00000221057 625 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm14825-201ENSMUST00000113538 701 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm14142-201ENSMUST00000117833 296 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm16383-201ENSMUST00000118122 232 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm13873-201ENSMUST00000119208 427 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm12587-201ENSMUST00000120180 427 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm12313-201ENSMUST00000121347 421 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm12276-201ENSMUST00000121709 301 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm22107-201ENSMUST00000122548 100 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm18486-201ENSMUST00000184040 298 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm7897-201ENSMUST00000193981 554 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm43214-201ENSMUST00000199242 352 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Snord35b-201ENSMUST00000082833 87 ntBASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
Chmp6P0C0A3 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.59□□□□□ -1.84
Chmp6P0C0A3 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.59□□□□□ -1.84
Chmp6P0C0A3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.59□□□□□ -1.84
Chmp6P0C0A3 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm16100-201ENSMUST00000120489 231 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm15733-201ENSMUST00000132957 242 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm15974-201ENSMUST00000159103 531 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm20542-201ENSMUST00000174582 372 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm6900-201ENSMUST00000178971 342 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm20574-201ENSMUST00000182867 917 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm26988-201ENSMUST00000183296 945 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm27233-201ENSMUST00000184030 307 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm28788-201ENSMUST00000189717 375 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm29558-201ENSMUST00000190134 375 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm3933-201ENSMUST00000195391 439 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm45063-201ENSMUST00000203726 472 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm44857-201ENSMUST00000208331 196 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm30674-201ENSMUST00000214523 392 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm8249-201ENSMUST00000219225 465 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm8274-201ENSMUST00000219820 463 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm23447-201ENSMUST00000082798 163 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.58□□□□□ -1.84
Chmp6P0C0A3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm26143-201ENSMUST00000104480 108 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm23609-201ENSMUST00000104542 127 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm15988-201ENSMUST00000118677 367 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm11797-201ENSMUST00000121336 754 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm6762-201ENSMUST00000121769 289 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm24289-201ENSMUST00000157629 135 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm28785-201ENSMUST00000187478 379 ntBASIC3.57□□□□□ -1.84
Chmp6P0C0A3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.57□□□□□ -1.84
Chmp6P0C0A3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Chmp6P0C0A3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms