Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.58□□□□□ -1.68
Hoxd3P09027 Gm23625-201ENSMUST00000082457 100 ntBASIC4.58□□□□□ -1.68
Hoxd3P09027 Gm23624-201ENSMUST00000082463 321 ntBASIC4.58□□□□□ -1.68
Hoxd3P09027 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hoxd3P09027 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Hoxd3P09027 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.58□□□□□ -1.68
Hoxd3P09027 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.58□□□□□ -1.68
Hoxd3P09027 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hoxd3P09027 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hoxd3P09027 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.58□□□□□ -1.68
Hoxd3P09027 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC4.58□□□□□ -1.68
Hoxd3P09027 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hoxd3P09027 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Hoxd3P09027 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm37926-201ENSMUST00000191922 2424 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Ankrd55-205ENSMUST00000223871 3209 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm14382-201ENSMUST00000117374 437 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm5379-201ENSMUST00000120973 826 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm14977-201ENSMUST00000121626 812 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm22867-201ENSMUST00000157499 109 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm22097-201ENSMUST00000157929 278 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm24731-201ENSMUST00000158227 131 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm26362-201ENSMUST00000158865 315 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm3370-201ENSMUST00000171785 500 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Mir3097-201ENSMUST00000175356 67 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm25450-201ENSMUST00000179144 107 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm27476-201ENSMUST00000183366 104 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm27285-201ENSMUST00000183875 127 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm43583-201ENSMUST00000199235 303 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm42961-201ENSMUST00000202023 181 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm45070-201ENSMUST00000208100 246 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC4.57□□□□□ -1.68
Hoxd3P09027 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.57□□□□□ -1.68
Hoxd3P09027 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Hoxd3P09027 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hoxd3P09027 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd3P09027 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm15846-201ENSMUST00000116022 320 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm15151-201ENSMUST00000117106 177 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm14694-201ENSMUST00000121856 282 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm25826-201ENSMUST00000157090 137 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm20401-201ENSMUST00000173717 212 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm37375-201ENSMUST00000193859 387 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm37385-201ENSMUST00000195223 387 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Mir6906-201ENSMUST00000198998 58 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm44076-201ENSMUST00000203072 520 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm45750-201ENSMUST00000211966 354 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 AL669819.1-201ENSMUST00000225143 330 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd3P09027 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm23737-201ENSMUST00000082547 159 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.56□□□□□ -1.68
Hoxd3P09027 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd3P09027 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd3P09027 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Hoxd3P09027 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms