Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.12□□□□□ -1.75
Lmx1bO88609 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm27611-201ENSMUST00000184690 108 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm27286-201ENSMUST00000184934 179 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm29556-201ENSMUST00000187591 696 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm37658-201ENSMUST00000192672 315 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm36984-201ENSMUST00000192770 235 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm37272-201ENSMUST00000193401 488 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm17954-201ENSMUST00000195893 607 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lmx1bO88609 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm45499-201ENSMUST00000211656 280 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm18442-201ENSMUST00000220925 639 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lmx1bO88609 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm22829-201ENSMUST00000083771 106 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lmx1bO88609 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lmx1bO88609 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.12□□□□□ -1.75
Lmx1bO88609 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Lmx1bO88609 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lmx1bO88609 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lmx1bO88609 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lmx1bO88609 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lmx1bO88609 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm23709-201ENSMUST00000104364 130 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm15177-201ENSMUST00000120491 577 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm2005-201ENSMUST00000120759 542 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm14303-201ENSMUST00000121320 171 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm22563-201ENSMUST00000157333 269 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm25913-201ENSMUST00000157617 135 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm22383-201ENSMUST00000158188 327 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm24664-201ENSMUST00000158939 100 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm14527-201ENSMUST00000179300 639 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm22631-201ENSMUST00000179656 94 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm22307-201ENSMUST00000180019 107 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm24306-201ENSMUST00000180229 79 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm27660-201ENSMUST00000184028 208 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm28141-201ENSMUST00000186676 342 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm5372-201ENSMUST00000187540 409 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm38050-201ENSMUST00000191904 238 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm43601-201ENSMUST00000196294 945 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm45146-201ENSMUST00000207108 221 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm45590-201ENSMUST00000209715 262 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm23464-201ENSMUST00000083145 147 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Snord22-201ENSMUST00000083153 126 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Snord38a-201ENSMUST00000083746 71 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lmx1bO88609 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm25821-201ENSMUST00000093657 133 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm16261-201ENSMUST00000096813 205 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lmx1bO88609 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lmx1bO88609 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.11□□□□□ -1.75
Lmx1bO88609 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Lmx1bO88609 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Lmx1bO88609 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Lmx1bO88609 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Lmx1bO88609 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.1□□□□□ -1.75
Lmx1bO88609 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lmx1bO88609 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lmx1bO88609 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lmx1bO88609 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lmx1bO88609 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
Lmx1bO88609 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.1□□□□□ -1.75
Lmx1bO88609 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lmx1bO88609 Gm11386-201ENSMUST00000117761 347 ntBASIC4.1□□□□□ -1.75
Lmx1bO88609 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms