Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 CT009765.2-201ENSMUST00000221331 392 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hmgb3O54879 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm9765-201ENSMUST00000043170 321 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hmgb3O54879 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Hmgb3O54879 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Hmgb3O54879 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Hmgb3O54879 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm24715-201ENSMUST00000102377 95 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm24935-201ENSMUST00000103770 110 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm9850-201ENSMUST00000117916 227 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm13873-201ENSMUST00000119208 427 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm26477-201ENSMUST00000122617 323 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm22613-201ENSMUST00000122679 292 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm22986-201ENSMUST00000122753 130 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm22858-201ENSMUST00000174972 76 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm29105-201ENSMUST00000187256 450 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm37817-201ENSMUST00000195276 434 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm44157-201ENSMUST00000204720 410 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm45273-201ENSMUST00000211559 281 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.49□□□□□ -2.01
Hmgb3O54879 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm18363-201ENSMUST00000221671 730 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm26226-201ENSMUST00000082509 116 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm22971-201ENSMUST00000083305 97 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Hmgb3O54879 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Hmgb3O54879 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.49□□□□□ -2.01
Hmgb3O54879 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.48□□□□□ -2.01
Hmgb3O54879 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm15268-201ENSMUST00000118845 352 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm16274-201ENSMUST00000139251 592 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm23540-201ENSMUST00000157543 164 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm22766-201ENSMUST00000158372 99 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm26928-201ENSMUST00000182674 572 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm28628-201ENSMUST00000187006 264 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm28629-201ENSMUST00000187309 263 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm28191-201ENSMUST00000189112 211 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Hmgb3O54879 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm43104-201ENSMUST00000197234 311 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm2189-201ENSMUST00000201419 429 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hmgb3O54879 AC132104.1-201ENSMUST00000213615 260 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm18557-201ENSMUST00000218710 433 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Gm13058-201ENSMUST00000117097 1435 ntBASIC2.48□□□□□ -2.01
Hmgb3O54879 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Hmgb3O54879 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hmgb3O54879 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm22272-201ENSMUST00000104039 134 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm23530-201ENSMUST00000104564 137 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm15783-201ENSMUST00000117521 633 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm7123-201ENSMUST00000117647 213 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm12803-201ENSMUST00000118907 821 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm12587-201ENSMUST00000120180 427 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Hmgb3O54879 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.47□□□□□ -2.01
Hmgb3O54879 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms