Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm45778-201ENSMUST00000211959 153 ntBASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Gm18645-202ENSMUST00000212222 760 ntBASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 AC158631.2-201ENSMUST00000219999 478 ntBASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 LOC667541-201ENSMUST00000223408 278 ntBASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Gm25004-201ENSMUST00000083811 161 ntBASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm44527-202ENSMUST00000204519 1314 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm14677-201ENSMUST00000117866 486 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm12858-201ENSMUST00000121913 208 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm13471-201ENSMUST00000122057 433 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm25386-201ENSMUST00000157814 288 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm25438-201ENSMUST00000158281 110 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm25902-201ENSMUST00000158493 318 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm21756-201ENSMUST00000178380 930 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm4479-201ENSMUST00000178807 171 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm21405-201ENSMUST00000179024 930 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm28390-201ENSMUST00000185212 700 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm21191-201ENSMUST00000186484 930 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm29503-201ENSMUST00000191044 930 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm32447-201ENSMUST00000194265 697 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm44354-201ENSMUST00000196017 143 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm19243-201ENSMUST00000198592 269 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm22970-201ENSMUST00000083304 186 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Mir134-201ENSMUST00000083492 71 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Trav11A0A0B4J1J9 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Mir761-201ENSMUST00000103245 76 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm24281-201ENSMUST00000104234 136 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm14981-201ENSMUST00000117325 943 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm12902-201ENSMUST00000118389 322 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm15988-201ENSMUST00000118677 367 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm11982-201ENSMUST00000121480 314 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm20534-201ENSMUST00000172957 172 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Mir6414-201ENSMUST00000183685 82 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm27715-201ENSMUST00000184714 260 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms