Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm37025-201ENSMUST00000195159 829 ntBASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.41■□□□□ 0.86
Hmg20bQ9Z104 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Gm17661-201ENSMUST00000170317 270 ntBASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmg20bQ9Z104 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmg20bQ9Z104 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmg20bQ9Z104 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmg20bQ9Z104 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmg20bQ9Z104 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmg20bQ9Z104 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmg20bQ9Z104 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmg20bQ9Z104 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.39■□□□□ 0.85
Hmg20bQ9Z104 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmg20bQ9Z104 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Gm22240-201ENSMUST00000175225 82 ntBASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmg20bQ9Z104 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmg20bQ9Z104 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmg20bQ9Z104 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmg20bQ9Z104 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmg20bQ9Z104 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmg20bQ9Z104 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.35■□□□□ 0.85
Hmg20bQ9Z104 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.35■□□□□ 0.85
Hmg20bQ9Z104 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hmg20bQ9Z104 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Gm38027-201ENSMUST00000192315 235 ntBASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms