Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cx3cr1Q9Z0D9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cr1Q9Z0D9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cr1Q9Z0D9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cr1Q9Z0D9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms