Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.47□□□□□ -0.25
CcsQ9WU84 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CcsQ9WU84 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CcsQ9WU84 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CcsQ9WU84 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Gm37179-201ENSMUST00000194862 823 ntBASIC13.46□□□□□ -0.25
CcsQ9WU84 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.46□□□□□ -0.25
CcsQ9WU84 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CcsQ9WU84 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CcsQ9WU84 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CcsQ9WU84 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CcsQ9WU84 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CcsQ9WU84 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CcsQ9WU84 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CcsQ9WU84 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.45□□□□□ -0.26
CcsQ9WU84 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.45□□□□□ -0.26
CcsQ9WU84 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CcsQ9WU84 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CcsQ9WU84 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.44□□□□□ -0.26
CcsQ9WU84 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.44□□□□□ -0.26
CcsQ9WU84 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.44□□□□□ -0.26
CcsQ9WU84 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Gm13146-201ENSMUST00000118508 780 ntBASIC13.44□□□□□ -0.26
CcsQ9WU84 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.44□□□□□ -0.26
CcsQ9WU84 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.44□□□□□ -0.26
CcsQ9WU84 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CcsQ9WU84 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CcsQ9WU84 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CcsQ9WU84 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Gm8969-201ENSMUST00000199694 526 ntBASIC13.43□□□□□ -0.26
CcsQ9WU84 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.43□□□□□ -0.26
CcsQ9WU84 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CcsQ9WU84 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CcsQ9WU84 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
CcsQ9WU84 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CcsQ9WU84 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CcsQ9WU84 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms