Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubd1Q9R1K7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.58■□□□□ 0.41
Tubd1Q9R1K7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubd1Q9R1K7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tubd1Q9R1K7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Tubd1Q9R1K7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tubd1Q9R1K7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Gm5417-201ENSMUST00000079706 384 ntBASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubd1Q9R1K7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Gm27463-201ENSMUST00000183569 57 ntBASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tubd1Q9R1K7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Gm10252-201ENSMUST00000209541 832 ntBASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubd1Q9R1K7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubd1Q9R1K7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubd1Q9R1K7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.54■□□□□ 0.4
Tubd1Q9R1K7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms