Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Gm37025-201ENSMUST00000195159 829 ntBASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shroom3Q9QXN0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.35■□□□□ 0.37
Shroom3Q9QXN0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom3Q9QXN0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Gm21362-201ENSMUST00000194272 928 ntBASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.33■□□□□ 0.37
Shroom3Q9QXN0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom3Q9QXN0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom3Q9QXN0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom3Q9QXN0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shroom3Q9QXN0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.33■□□□□ 0.36
Shroom3Q9QXN0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shroom3Q9QXN0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms