Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Mir2861-201ENSMUST00000175539 82 ntBASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lsm4Q9QXA5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm4Q9QXA5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm4Q9QXA5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Lsm4Q9QXA5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Gm13401-201ENSMUST00000117074 291 ntBASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm4Q9QXA5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms