Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.68■□□□□ 0.42
Msh5Q9QUM7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh5Q9QUM7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Dio3-201ENSMUST00000097228 1449 ntBASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Zfp783-201ENSMUST00000095946 670 ntBASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh5Q9QUM7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh5Q9QUM7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Msh5Q9QUM7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Msh5Q9QUM7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Msh5Q9QUM7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh5Q9QUM7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms