Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf1Q9EPU4 Gm5587-201ENSMUST00000206270 674 ntBASIC23.94■■□□□ 1.42
Cpsf1Q9EPU4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf1Q9EPU4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf1Q9EPU4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf1Q9EPU4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.94■■□□□ 1.42
Cpsf1Q9EPU4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf1Q9EPU4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Gm43808-201ENSMUST00000202534 2065 ntBASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf1Q9EPU4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Gm8258-201ENSMUST00000055593 1449 ntBASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf1Q9EPU4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Gm9013-201ENSMUST00000132939 882 ntBASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf1Q9EPU4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Gm37519-201ENSMUST00000191687 2210 ntBASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Ank2-226ENSMUST00000189368 339 ntBASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf1Q9EPU4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf1Q9EPU4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf1Q9EPU4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf1Q9EPU4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC23.89■■□□□ 1.42
Cpsf1Q9EPU4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Gm25016-201ENSMUST00000158399 131 ntBASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf1Q9EPU4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Gm27389-201ENSMUST00000183622 195 ntBASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Gm37194-201ENSMUST00000193092 3031 ntBASIC23.88■■□□□ 1.41
Cpsf1Q9EPU4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Gm13186-201ENSMUST00000118031 316 ntBASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms