Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndufa11Q9D8B4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndufa11Q9D8B4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndufa11Q9D8B4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndufa11Q9D8B4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ndufa11Q9D8B4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndufa11Q9D8B4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Gm10052-201ENSMUST00000168019 960 ntBASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Gm7729-201ENSMUST00000050143 801 ntBASIC14.93□□□□□ -0.02
Ndufa11Q9D8B4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Mir8112-201ENSMUST00000184382 131 ntBASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 AW822252-206ENSMUST00000208904 237 ntBASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndufa11Q9D8B4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ndufa11Q9D8B4 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndufa11Q9D8B4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Gm11336-201ENSMUST00000118168 334 ntBASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndufa11Q9D8B4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms