Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf225Q9D7D1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf225Q9D7D1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf225Q9D7D1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf225Q9D7D1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf225Q9D7D1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf225Q9D7D1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf225Q9D7D1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf225Q9D7D1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf225Q9D7D1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf225Q9D7D1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf225Q9D7D1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf225Q9D7D1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Gm19087-201ENSMUST00000191430 946 ntBASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf225Q9D7D1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf225Q9D7D1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Gm37319-201ENSMUST00000193500 636 ntBASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf225Q9D7D1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.09■□□□□ 0.49
Rnf225Q9D7D1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf225Q9D7D1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf225Q9D7D1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms