Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.4■□□□□ 0.54
Gm3404Q9D506 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gm3404Q9D506 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3404Q9D506 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Mir8112-201ENSMUST00000184382 131 ntBASIC18.38■□□□□ 0.53
Gm3404Q9D506 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.38■□□□□ 0.53
Gm3404Q9D506 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.38■□□□□ 0.53
Gm3404Q9D506 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm3404Q9D506 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3404Q9D506 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Mir5122-201ENSMUST00000175004 89 ntBASIC18.37■□□□□ 0.53
Gm3404Q9D506 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.37■□□□□ 0.53
Gm3404Q9D506 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3404Q9D506 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.36■□□□□ 0.53
Gm3404Q9D506 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.36■□□□□ 0.53
Gm3404Q9D506 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gm3404Q9D506 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Gm3404Q9D506 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.35■□□□□ 0.53
Gm3404Q9D506 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Timm23-208ENSMUST00000226683 750 ntBASIC18.35■□□□□ 0.53
Gm3404Q9D506 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 159.7 ms