Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Gm12382-201ENSMUST00000122005 922 ntBASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Gm37856-201ENSMUST00000191634 999 ntBASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrrc40Q9CRC8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Gm12527-201ENSMUST00000117967 564 ntBASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Gm37292-201ENSMUST00000192062 758 ntBASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Gm4974-201ENSMUST00000209974 875 ntBASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lrrc40Q9CRC8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrc40Q9CRC8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrc40Q9CRC8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms