Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.94■□□□□ 0.3
Trim16Q99PP9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Mtag2-201ENSMUST00000058665 714 ntBASIC16.94■□□□□ 0.3
Trim16Q99PP9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim16Q99PP9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.93■□□□□ 0.3
Trim16Q99PP9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.93■□□□□ 0.3
Trim16Q99PP9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim16Q99PP9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim16Q99PP9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.91■□□□□ 0.3
Trim16Q99PP9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.91■□□□□ 0.3
Trim16Q99PP9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim16Q99PP9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.9■□□□□ 0.3
Trim16Q99PP9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.9■□□□□ 0.3
Trim16Q99PP9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim16Q99PP9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim16Q99PP9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.89■□□□□ 0.3
Trim16Q99PP9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim16Q99PP9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim16Q99PP9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim16Q99PP9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms