Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh15Q99PJ1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Gm43575-201ENSMUST00000196420 516 ntBASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh15Q99PJ1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh15Q99PJ1 Gm7862-201ENSMUST00000121461 292 ntBASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdh15Q99PJ1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh15Q99PJ1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh15Q99PJ1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh15Q99PJ1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh15Q99PJ1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh15Q99PJ1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Pcdh15Q99PJ1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdh15Q99PJ1 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.64■□□□□ 0.73
Pcdh15Q99PJ1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh15Q99PJ1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh15Q99PJ1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms