Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc4Q99J62 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rfc4Q99J62 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Gm27357-201ENSMUST00000183754 135 ntBASIC19.93■□□□□ 0.78
Rfc4Q99J62 Gm27742-201ENSMUST00000184667 60 ntBASIC19.93■□□□□ 0.78
Rfc4Q99J62 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc4Q99J62 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc4Q99J62 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.91■□□□□ 0.78
Rfc4Q99J62 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.91■□□□□ 0.78
Rfc4Q99J62 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Rfc4Q99J62 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Mir770-201ENSMUST00000103252 94 ntBASIC19.9■□□□□ 0.78
Rfc4Q99J62 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Actl10-202ENSMUST00000226583 1501 ntBASIC19.9■□□□□ 0.78
Rfc4Q99J62 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc4Q99J62 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc4Q99J62 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Gm37722-201ENSMUST00000193757 208 ntBASIC19.89■□□□□ 0.77
Rfc4Q99J62 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Gm44771-201ENSMUST00000206975 626 ntBASIC19.89■□□□□ 0.77
Rfc4Q99J62 Gm45328-201ENSMUST00000210942 917 ntBASIC19.89■□□□□ 0.77
Rfc4Q99J62 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Rfc4Q99J62 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms