Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tspan1Q99J59 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tspan1Q99J59 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tspan1Q99J59 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tspan1Q99J59 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.19■□□□□ 0.34
Tspan1Q99J59 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tspan1Q99J59 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tspan1Q99J59 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.17■□□□□ 0.34
Tspan1Q99J59 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.17■□□□□ 0.34
Tspan1Q99J59 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Gm7791-201ENSMUST00000219066 539 ntBASIC17.17■□□□□ 0.34
Tspan1Q99J59 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tspan1Q99J59 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tspan1Q99J59 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.16■□□□□ 0.34
Tspan1Q99J59 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.16■□□□□ 0.34
Tspan1Q99J59 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.15■□□□□ 0.34
Tspan1Q99J59 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.15■□□□□ 0.34
Tspan1Q99J59 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Gm13559-201ENSMUST00000120476 863 ntBASIC17.15■□□□□ 0.34
Tspan1Q99J59 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tspan1Q99J59 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.15■□□□□ 0.34
Tspan1Q99J59 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tspan1Q99J59 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Tspan1Q99J59 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.14■□□□□ 0.33
Tspan1Q99J59 Gm15565-201ENSMUST00000118890 427 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms