Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha9Q91Y11 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Gm37055-201ENSMUST00000191866 133 ntBASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pcdha9Q91Y11 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Gm9731-201ENSMUST00000209480 747 ntBASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha9Q91Y11 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Gm10252-201ENSMUST00000209541 832 ntBASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Gm5417-201ENSMUST00000079706 384 ntBASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha9Q91Y11 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha9Q91Y11 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms