Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Gm27742-201ENSMUST00000184667 60 ntBASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac2Q91Y09 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac2Q91Y09 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac2Q91Y09 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac2Q91Y09 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhac2Q91Y09 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Gm7153-201ENSMUST00000117092 455 ntBASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac2Q91Y09 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Gm27357-201ENSMUST00000183754 135 ntBASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac2Q91Y09 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhac2Q91Y09 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms