Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Gm24841-201ENSMUST00000158676 357 ntBASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Gm9694-201ENSMUST00000193347 1189 ntBASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb1Q91Y08 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Gm8520-201ENSMUST00000186517 868 ntBASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb1Q91Y08 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb1Q91Y08 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb1Q91Y08 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb1Q91Y08 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb1Q91Y08 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms