Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Mir8112-201ENSMUST00000184382 131 ntBASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb20Q91XZ9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Gm18351-201ENSMUST00000188646 883 ntBASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb20Q91XZ9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Gm44953-201ENSMUST00000208745 1286 ntBASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb20Q91XZ9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Gm14542-201ENSMUST00000118460 1248 ntBASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Gm13836-201ENSMUST00000121159 501 ntBASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhb20Q91XZ9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms