Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb5Q91XZ5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb5Q91XZ5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb5Q91XZ5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb5Q91XZ5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb5Q91XZ5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb5Q91XZ5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb5Q91XZ5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb5Q91XZ5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb5Q91XZ5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb5Q91XZ5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdhb5Q91XZ5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb5Q91XZ5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Gm11950-201ENSMUST00000121615 838 ntBASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb5Q91XZ5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Gm17807-201ENSMUST00000186869 298 ntBASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Grk6-206ENSMUST00000224995 2971 ntBASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb5Q91XZ5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Gm6623-201ENSMUST00000173570 544 ntBASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb5Q91XZ5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb5Q91XZ5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb5Q91XZ5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms