Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb6Q91XZ4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Mir1199-201ENSMUST00000117015 119 ntBASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb6Q91XZ4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb6Q91XZ4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb6Q91XZ4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb6Q91XZ4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhb6Q91XZ4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb6Q91XZ4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhb6Q91XZ4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb6Q91XZ4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb6Q91XZ4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Gm17661-201ENSMUST00000170317 270 ntBASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Gm22240-201ENSMUST00000175225 82 ntBASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms