Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Mtag2-201ENSMUST00000058665 714 ntBASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Gm8520-201ENSMUST00000186517 868 ntBASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga11Q91XY8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga11Q91XY8 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga11Q91XY8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Gm15375-201ENSMUST00000119510 849 ntBASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Gm22240-201ENSMUST00000175225 82 ntBASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga11Q91XY8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Gm12896-201ENSMUST00000118430 226 ntBASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms