Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.14■□□□□ 0.34
Pcdhga9Q91XX9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga9Q91XX9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga9Q91XX9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Gm9987-201ENSMUST00000069768 567 ntBASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga9Q91XX9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhga9Q91XX9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms