Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgc3Q91XX1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgc3Q91XX1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgc3Q91XX1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Gm13534-201ENSMUST00000121169 513 ntBASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhgc3Q91XX1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhgc3Q91XX1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhgc3Q91XX1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhgc3Q91XX1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhgc3Q91XX1 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms