Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx41Q91VN6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx41Q91VN6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx41Q91VN6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx41Q91VN6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx41Q91VN6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Gm10517-202ENSMUST00000192970 758 ntBASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ddx41Q91VN6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx41Q91VN6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx41Q91VN6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Gm7889-201ENSMUST00000185591 958 ntBASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.79■□□□□ 0.76
Ddx41Q91VN6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms