Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhb11Q91UZ8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Mir5122-201ENSMUST00000175004 89 ntBASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb11Q91UZ8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb11Q91UZ8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb11Q91UZ8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb11Q91UZ8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Gm12085-201ENSMUST00000119263 940 ntBASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb11Q91UZ8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms