Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Gm11643-201ENSMUST00000119578 864 ntBASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H1fooQ8VIK3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Gm20049-201ENSMUST00000219950 730 ntBASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H1fooQ8VIK3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H1fooQ8VIK3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H1fooQ8VIK3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Gm6576-201ENSMUST00000169678 883 ntBASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H1fooQ8VIK3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H1fooQ8VIK3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H1fooQ8VIK3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H1fooQ8VIK3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms