Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim60Q8VI40 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Gm13401-201ENSMUST00000117074 291 ntBASIC17.94■□□□□ 0.46
Trim60Q8VI40 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim60Q8VI40 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Gm10138-203ENSMUST00000206952 366 ntBASIC17.93■□□□□ 0.46
Trim60Q8VI40 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim60Q8VI40 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Gm27405-201ENSMUST00000184201 112 ntBASIC17.92■□□□□ 0.46
Trim60Q8VI40 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim60Q8VI40 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim60Q8VI40 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.91■□□□□ 0.46
Trim60Q8VI40 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.91■□□□□ 0.46
Trim60Q8VI40 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim60Q8VI40 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.9■□□□□ 0.46
Trim60Q8VI40 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Gm12933-201ENSMUST00000120203 872 ntBASIC17.9■□□□□ 0.46
Trim60Q8VI40 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Gm2559-201ENSMUST00000201323 363 ntBASIC17.9■□□□□ 0.46
Trim60Q8VI40 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.9■□□□□ 0.46
Trim60Q8VI40 Gm4968-201ENSMUST00000071458 858 ntBASIC17.9■□□□□ 0.46
Trim60Q8VI40 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms