Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Gm24841-201ENSMUST00000158676 357 ntBASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Top1mtQ8R4U6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Top1mtQ8R4U6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.69■□□□□ 0.9
Top1mtQ8R4U6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.69■□□□□ 0.9
Top1mtQ8R4U6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Top1mtQ8R4U6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.69■□□□□ 0.9
Top1mtQ8R4U6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Top1mtQ8R4U6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Top1mtQ8R4U6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Top1mtQ8R4U6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Top1mtQ8R4U6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Mir1199-201ENSMUST00000117015 119 ntBASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Top1mtQ8R4U6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Top1mtQ8R4U6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms