Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Treml1Q8K558 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.05■□□□□ 0.32
Treml1Q8K558 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Treml1Q8K558 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Treml1Q8K558 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.04■□□□□ 0.32
Treml1Q8K558 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Gm24841-201ENSMUST00000158676 357 ntBASIC17.04■□□□□ 0.32
Treml1Q8K558 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.04■□□□□ 0.32
Treml1Q8K558 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.04■□□□□ 0.32
Treml1Q8K558 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.04■□□□□ 0.32
Treml1Q8K558 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Treml1Q8K558 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Treml1Q8K558 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Treml1Q8K558 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Treml1Q8K558 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Treml1Q8K558 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Treml1Q8K558 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.03■□□□□ 0.32
Treml1Q8K558 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Treml1Q8K558 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Treml1Q8K558 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.02■□□□□ 0.32
Treml1Q8K558 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Treml1Q8K558 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Treml1Q8K558 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.02■□□□□ 0.32
Treml1Q8K558 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.02■□□□□ 0.32
Treml1Q8K558 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Treml1Q8K558 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Treml1Q8K558 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Treml1Q8K558 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Treml1Q8K558 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Treml1Q8K558 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Treml1Q8K558 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Treml1Q8K558 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.01■□□□□ 0.31
Treml1Q8K558 Gm3375-201ENSMUST00000203929 796 ntBASIC17.01■□□□□ 0.31
Treml1Q8K558 Timm23-208ENSMUST00000226683 750 ntBASIC17.01■□□□□ 0.31
Treml1Q8K558 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Treml1Q8K558 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms