Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3a1Q8K4Z5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.19■□□□□ 0.98
Sf3a1Q8K4Z5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3a1Q8K4Z5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Gm37055-201ENSMUST00000191866 133 ntBASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Gm3375-201ENSMUST00000203929 796 ntBASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3a1Q8K4Z5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Gm38027-201ENSMUST00000192315 235 ntBASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3a1Q8K4Z5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.16■□□□□ 0.98
Sf3a1Q8K4Z5 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3a1Q8K4Z5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sf3a1Q8K4Z5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sf3a1Q8K4Z5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sf3a1Q8K4Z5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.14■□□□□ 0.98
Sf3a1Q8K4Z5 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.14■□□□□ 0.98
Sf3a1Q8K4Z5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3a1Q8K4Z5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Gm5417-201ENSMUST00000079706 384 ntBASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Sf3a1Q8K4Z5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms