Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Gm10812-201ENSMUST00000099864 546 ntBASIC16.35■□□□□ 0.21
Clrn1Q8K445 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.34■□□□□ 0.21
Clrn1Q8K445 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Gm10517-202ENSMUST00000192970 758 ntBASIC16.34■□□□□ 0.21
Clrn1Q8K445 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn1Q8K445 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.34■□□□□ 0.21
Clrn1Q8K445 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clrn1Q8K445 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Gm4974-201ENSMUST00000209974 875 ntBASIC16.33■□□□□ 0.2
Clrn1Q8K445 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clrn1Q8K445 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Clrn1Q8K445 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Clrn1Q8K445 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.32■□□□□ 0.2
Clrn1Q8K445 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.32■□□□□ 0.2
Clrn1Q8K445 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clrn1Q8K445 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.31■□□□□ 0.2
Clrn1Q8K445 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clrn1Q8K445 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms