Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cchcr1Q8K2I2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cchcr1Q8K2I2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cchcr1Q8K2I2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cchcr1Q8K2I2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Gm18025-201ENSMUST00000221733 862 ntBASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cchcr1Q8K2I2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cchcr1Q8K2I2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms