Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.3■□□□□ 0.36
Scara5Q8K299 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scara5Q8K299 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.29■□□□□ 0.36
Scara5Q8K299 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Scara5Q8K299 Gm27357-201ENSMUST00000183754 135 ntBASIC17.29■□□□□ 0.36
Scara5Q8K299 Il3ra-202ENSMUST00000223589 738 ntBASIC17.29■□□□□ 0.36
Scara5Q8K299 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scara5Q8K299 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Scara5Q8K299 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.29■□□□□ 0.36
Scara5Q8K299 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scara5Q8K299 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scara5Q8K299 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Scara5Q8K299 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.28■□□□□ 0.36
Scara5Q8K299 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Gm10418-201ENSMUST00000100943 576 ntBASIC17.28■□□□□ 0.36
Scara5Q8K299 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.28■□□□□ 0.36
Scara5Q8K299 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scara5Q8K299 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scara5Q8K299 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scara5Q8K299 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.28■□□□□ 0.36
Scara5Q8K299 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scara5Q8K299 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.27■□□□□ 0.36
Scara5Q8K299 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scara5Q8K299 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Scara5Q8K299 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Scara5Q8K299 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scara5Q8K299 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scara5Q8K299 Gm13401-201ENSMUST00000117074 291 ntBASIC17.27■□□□□ 0.36
Scara5Q8K299 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.27■□□□□ 0.36
Scara5Q8K299 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scara5Q8K299 Gm18115-201ENSMUST00000221209 621 ntBASIC17.27■□□□□ 0.36
Scara5Q8K299 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scara5Q8K299 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Scara5Q8K299 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Gm24589-201ENSMUST00000116692 94 ntBASIC17.26■□□□□ 0.35
Scara5Q8K299 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.26■□□□□ 0.35
Scara5Q8K299 Gm27742-201ENSMUST00000184667 60 ntBASIC17.26■□□□□ 0.35
Scara5Q8K299 Gm9731-201ENSMUST00000209480 747 ntBASIC17.26■□□□□ 0.35
Scara5Q8K299 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scara5Q8K299 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scara5Q8K299 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Scara5Q8K299 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scara5Q8K299 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scara5Q8K299 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scara5Q8K299 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scara5Q8K299 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scara5Q8K299 Gm26039-201ENSMUST00000158152 144 ntBASIC17.25■□□□□ 0.35
Scara5Q8K299 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.25■□□□□ 0.35
Scara5Q8K299 Mzt1-203ENSMUST00000227948 952 ntBASIC17.25■□□□□ 0.35
Scara5Q8K299 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Scara5Q8K299 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scara5Q8K299 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scara5Q8K299 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.25■□□□□ 0.35
Scara5Q8K299 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scara5Q8K299 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms