Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm7977-201ENSMUST00000193787 748 ntBASIC17.68■□□□□ 0.42
CopaQ8CIE6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopaQ8CIE6 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.68■□□□□ 0.42
CopaQ8CIE6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.67■□□□□ 0.42
CopaQ8CIE6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.67■□□□□ 0.42
CopaQ8CIE6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.67■□□□□ 0.42
CopaQ8CIE6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopaQ8CIE6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.66■□□□□ 0.42
CopaQ8CIE6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Gm37292-201ENSMUST00000192062 758 ntBASIC17.66■□□□□ 0.42
CopaQ8CIE6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopaQ8CIE6 Tgds-204ENSMUST00000228543 1594 ntBASIC17.66■□□□□ 0.42
CopaQ8CIE6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CopaQ8CIE6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CopaQ8CIE6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.65■□□□□ 0.42
CopaQ8CIE6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Gm5417-201ENSMUST00000079706 384 ntBASIC17.64■□□□□ 0.41
CopaQ8CIE6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CopaQ8CIE6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CopaQ8CIE6 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.64■□□□□ 0.41
CopaQ8CIE6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CopaQ8CIE6 Mir6349-201ENSMUST00000184059 97 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms